Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm7287-201ENSMUST00000205267 602 ntBASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Gm11814-201ENSMUST00000119515 929 ntBASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Gm9728-201ENSMUST00000200197 1055 ntBASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col16a1Q8BLX7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Gm38230-201ENSMUST00000193572 1159 ntBASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Gm19078-201ENSMUST00000206311 727 ntBASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col16a1Q8BLX7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Gm15376-201ENSMUST00000122258 783 ntBASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Gm24196-201ENSMUST00000179161 110 ntBASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Gm27486-201ENSMUST00000184923 80 ntBASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Gm18027-201ENSMUST00000218947 619 ntBASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col16a1Q8BLX7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC18.9■□□□□ 0.62
Col16a1Q8BLX7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Col16a1Q8BLX7 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col16a1Q8BLX7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col16a1Q8BLX7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col16a1Q8BLX7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col16a1Q8BLX7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col16a1Q8BLX7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col16a1Q8BLX7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col16a1Q8BLX7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col16a1Q8BLX7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.9■□□□□ 0.62
Col16a1Q8BLX7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms