Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Gm9726-201ENSMUST00000180321 678 ntBASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Gm2451-201ENSMUST00000199447 999 ntBASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Gm10290-201ENSMUST00000200451 999 ntBASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Gm45747-201ENSMUST00000212203 999 ntBASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Thap2-203ENSMUST00000218989 527 ntBASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc116Q80X53 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Gm9385-201ENSMUST00000117563 472 ntBASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Gm16026-204ENSMUST00000162652 683 ntBASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Psmb5-202ENSMUST00000227257 622 ntBASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Gm10154-201ENSMUST00000084445 354 ntBASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc116Q80X53 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Gm18733-201ENSMUST00000173950 856 ntBASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms