Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm27359-201ENSMUST00000184153 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm27785-201ENSMUST00000184268 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm27466-201ENSMUST00000184396 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm27703-201ENSMUST00000184836 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm43474-201ENSMUST00000196415 774 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trim62Q80V85 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim62Q80V85 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim62Q80V85 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trim62Q80V85 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.17■□□□□ 0.02
Trim62Q80V85 Gm24158-201ENSMUST00000175263 71 ntBASIC15.17■□□□□ 0.02
Trim62Q80V85 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.17■□□□□ 0.02
Trim62Q80V85 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim62Q80V85 Gm10253-201ENSMUST00000194270 940 ntBASIC15.17■□□□□ 0.02
Trim62Q80V85 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Trim62Q80V85 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.17■□□□□ 0.02
Trim62Q80V85 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Trim62Q80V85 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.17■□□□□ 0.02
Trim62Q80V85 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim62Q80V85 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim62Q80V85 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim62Q80V85 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim62Q80V85 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Gm18049-201ENSMUST00000208909 581 ntBASIC15.16■□□□□ 0.02
Trim62Q80V85 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.16■□□□□ 0.02
Trim62Q80V85 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trim62Q80V85 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim62Q80V85 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim62Q80V85 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.16■□□□□ 0.02
Trim62Q80V85 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim62Q80V85 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim62Q80V85 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim62Q80V85 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.15■□□□□ 0.02
Trim62Q80V85 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim62Q80V85 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim62Q80V85 Gm14701-201ENSMUST00000117156 348 ntBASIC15.15■□□□□ 0.02
Trim62Q80V85 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.15■□□□□ 0.02
Trim62Q80V85 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.15■□□□□ 0.02
Trim62Q80V85 Gm14042-201ENSMUST00000120139 833 ntBASIC15.15■□□□□ 0.02
Trim62Q80V85 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim62Q80V85 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.15■□□□□ 0.02
Trim62Q80V85 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim62Q80V85 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trim62Q80V85 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.15■□□□□ 0.02
Trim62Q80V85 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.15■□□□□ 0.02
Trim62Q80V85 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim62Q80V85 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms