Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Gm22240-201ENSMUST00000175225 82 ntBASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RfflQ6ZQM0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Gm4459-201ENSMUST00000118750 468 ntBASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Rprl3-201ENSMUST00000157400 290 ntBASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RfflQ6ZQM0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Gm25745-201ENSMUST00000174945 133 ntBASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Mir3081-201ENSMUST00000175305 84 ntBASIC14.18□□□□□ -0.14
RfflQ6ZQM0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Gm29257-201ENSMUST00000186115 639 ntBASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Gm45328-201ENSMUST00000210942 917 ntBASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RfflQ6ZQM0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms