Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scaf4Q6PFF0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Gm5682-201ENSMUST00000173402 505 ntBASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Gm37153-201ENSMUST00000193637 231 ntBASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scaf4Q6PFF0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scaf4Q6PFF0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scaf4Q6PFF0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scaf4Q6PFF0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scaf4Q6PFF0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Scaf4Q6PFF0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.46□□□□□ -0.1
Scaf4Q6PFF0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scaf4Q6PFF0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scaf4Q6PFF0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scaf4Q6PFF0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms