Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Olfr286-202ENSMUST00000205305 969 ntBASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Gm6916-202ENSMUST00000205523 195 ntBASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Snrnp40Q6PE01 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Snrnp40Q6PE01 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Snrnp40Q6PE01 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Snrnp40Q6PE01 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Gm15393-201ENSMUST00000120499 219 ntBASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Gm9726-201ENSMUST00000180321 678 ntBASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Gm33320-201ENSMUST00000192232 530 ntBASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Gm43630-201ENSMUST00000201550 776 ntBASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.83□□□□□ -0.36
Snrnp40Q6PE01 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms