Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Gm9385-201ENSMUST00000117563 472 ntBASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc2Q6PDG5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Gm16026-204ENSMUST00000162652 683 ntBASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc2Q6PDG5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc2Q6PDG5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc2Q6PDG5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc2Q6PDG5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc2Q6PDG5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc2Q6PDG5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc2Q6PDG5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc2Q6PDG5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.33
Smarcc2Q6PDG5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms