Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Casc4Q6P2L7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Casc4Q6P2L7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Casc4Q6P2L7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Casc4Q6P2L7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Casc4Q6P2L7 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Casc4Q6P2L7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Gm12134-201ENSMUST00000122109 520 ntBASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Gm27397-201ENSMUST00000184997 107 ntBASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Casc4Q6P2L7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Gm24513-201ENSMUST00000174964 138 ntBASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Casc4Q6P2L7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Casc4Q6P2L7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Casc4Q6P2L7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Casc4Q6P2L7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Casc4Q6P2L7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Casc4Q6P2L7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Casc4Q6P2L7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Casc4Q6P2L7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Casc4Q6P2L7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Casc4Q6P2L7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Casc4Q6P2L7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Casc4Q6P2L7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Casc4Q6P2L7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.83□□□□□ -0.04
Casc4Q6P2L7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.83□□□□□ -0.04
Casc4Q6P2L7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms