Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Mir6990-201ENSMUST00000183724 91 ntBASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtl3Q6P1Y1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Gm27920-201ENSMUST00000183953 96 ntBASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Gm43125-201ENSMUST00000201724 730 ntBASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Rtl3Q6P1Y1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.02
Rtl3Q6P1Y1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.02
Rtl3Q6P1Y1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Gm43474-201ENSMUST00000196415 774 ntBASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtl3Q6P1Y1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Gm2451-201ENSMUST00000199447 999 ntBASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Gm10290-201ENSMUST00000200451 999 ntBASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtl3Q6P1Y1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms