Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Six3Q62233 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Six3Q62233 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.34□□□□□ -0.11
Six3Q62233 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.34□□□□□ -0.11
Six3Q62233 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Six3Q62233 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Six3Q62233 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Six3Q62233 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.34□□□□□ -0.11
Six3Q62233 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Six3Q62233 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.34□□□□□ -0.11
Six3Q62233 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Six3Q62233 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Six3Q62233 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six3Q62233 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Six3Q62233 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Six3Q62233 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Six3Q62233 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Six3Q62233 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Six3Q62233 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.33□□□□□ -0.12
Six3Q62233 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Six3Q62233 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Gm12350-201ENSMUST00000121208 462 ntBASIC14.33□□□□□ -0.12
Six3Q62233 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
Six3Q62233 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Six3Q62233 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Six3Q62233 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Six3Q62233 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.33□□□□□ -0.12
Six3Q62233 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
Six3Q62233 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Six3Q62233 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Six3Q62233 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.33□□□□□ -0.12
Six3Q62233 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.33□□□□□ -0.12
Six3Q62233 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.33□□□□□ -0.12
Six3Q62233 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.33□□□□□ -0.12
Six3Q62233 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.33□□□□□ -0.12
Six3Q62233 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six3Q62233 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.32□□□□□ -0.12
Six3Q62233 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.32□□□□□ -0.12
Six3Q62233 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Six3Q62233 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.32□□□□□ -0.12
Six3Q62233 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.32□□□□□ -0.12
Six3Q62233 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.32□□□□□ -0.12
Six3Q62233 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.32□□□□□ -0.12
Six3Q62233 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Six3Q62233 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Six3Q62233 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms