Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox17Q61473 Gm10252-201ENSMUST00000209541 832 ntBASIC13.78□□□□□ -0.2
Sox17Q61473 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.78□□□□□ -0.2
Sox17Q61473 Gm8655-201ENSMUST00000221159 852 ntBASIC13.78□□□□□ -0.2
Sox17Q61473 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sox17Q61473 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Sox17Q61473 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sox17Q61473 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sox17Q61473 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Sox17Q61473 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox17Q61473 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox17Q61473 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox17Q61473 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox17Q61473 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox17Q61473 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Sox17Q61473 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox17Q61473 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.77□□□□□ -0.21
Sox17Q61473 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox17Q61473 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox17Q61473 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.77□□□□□ -0.21
Sox17Q61473 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Sox17Q61473 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox17Q61473 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.77□□□□□ -0.21
Sox17Q61473 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sox17Q61473 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox17Q61473 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.77□□□□□ -0.21
Sox17Q61473 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sox17Q61473 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sox17Q61473 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox17Q61473 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.76□□□□□ -0.21
Sox17Q61473 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.76□□□□□ -0.21
Sox17Q61473 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox17Q61473 Gm25016-201ENSMUST00000158399 131 ntBASIC13.76□□□□□ -0.21
Sox17Q61473 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox17Q61473 Gm27646-201ENSMUST00000183989 110 ntBASIC13.76□□□□□ -0.21
Sox17Q61473 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Sox17Q61473 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox17Q61473 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sox17Q61473 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sox17Q61473 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sox17Q61473 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox17Q61473 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms