Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Six4Q61321 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Six4Q61321 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Six4Q61321 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.78□□□□□ -0.04
Six4Q61321 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Six4Q61321 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.78□□□□□ -0.04
Six4Q61321 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.78□□□□□ -0.04
Six4Q61321 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.78□□□□□ -0.04
Six4Q61321 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.78□□□□□ -0.04
Six4Q61321 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Gm23547-201ENSMUST00000158210 271 ntBASIC14.78□□□□□ -0.04
Six4Q61321 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.78□□□□□ -0.04
Six4Q61321 Gm43474-201ENSMUST00000196415 774 ntBASIC14.78□□□□□ -0.04
Six4Q61321 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Six4Q61321 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Six4Q61321 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.78□□□□□ -0.04
Six4Q61321 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Six4Q61321 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six4Q61321 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Six4Q61321 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Six4Q61321 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Six4Q61321 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Six4Q61321 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.77□□□□□ -0.04
Six4Q61321 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Six4Q61321 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Six4Q61321 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Six4Q61321 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
Six4Q61321 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.77□□□□□ -0.04
Six4Q61321 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Six4Q61321 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Six4Q61321 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Six4Q61321 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.77□□□□□ -0.04
Six4Q61321 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Six4Q61321 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Six4Q61321 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Six4Q61321 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Six4Q61321 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Six4Q61321 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.77□□□□□ -0.05
Six4Q61321 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.77□□□□□ -0.05
Six4Q61321 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.77□□□□□ -0.05
Six4Q61321 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.77□□□□□ -0.05
Six4Q61321 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.77□□□□□ -0.05
Six4Q61321 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.77□□□□□ -0.05
Six4Q61321 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Six4Q61321 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.77□□□□□ -0.05
Six4Q61321 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Six4Q61321 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Six4Q61321 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Six4Q61321 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Six4Q61321 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Six4Q61321 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Six4Q61321 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Six4Q61321 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Six4Q61321 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Six4Q61321 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.76□□□□□ -0.05
Six4Q61321 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Six4Q61321 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Six4Q61321 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.76□□□□□ -0.05
Six4Q61321 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.76□□□□□ -0.05
Six4Q61321 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.76□□□□□ -0.05
Six4Q61321 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Six4Q61321 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms