Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ripk1Q60855 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ripk1Q60855 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ripk1Q60855 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ripk1Q60855 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ripk1Q60855 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ripk1Q60855 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Ripk1Q60855 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Ripk1Q60855 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ripk1Q60855 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ripk1Q60855 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ripk1Q60855 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.83□□□□□ -0.19
Ripk1Q60855 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ripk1Q60855 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ripk1Q60855 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ripk1Q60855 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Ripk1Q60855 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.83□□□□□ -0.2
Ripk1Q60855 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.83□□□□□ -0.2
Ripk1Q60855 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.83□□□□□ -0.2
Ripk1Q60855 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
Ripk1Q60855 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.83□□□□□ -0.2
Ripk1Q60855 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.83□□□□□ -0.2
Ripk1Q60855 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ripk1Q60855 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.83□□□□□ -0.2
Ripk1Q60855 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ripk1Q60855 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ripk1Q60855 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.82□□□□□ -0.2
Ripk1Q60855 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Gm1401-201ENSMUST00000122048 772 ntBASIC13.82□□□□□ -0.2
Ripk1Q60855 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.82□□□□□ -0.2
Ripk1Q60855 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ripk1Q60855 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ripk1Q60855 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Ripk1Q60855 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ripk1Q60855 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.82□□□□□ -0.2
Ripk1Q60855 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ripk1Q60855 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ripk1Q60855 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ripk1Q60855 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ripk1Q60855 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ripk1Q60855 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ripk1Q60855 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ripk1Q60855 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ripk1Q60855 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.81□□□□□ -0.2
Ripk1Q60855 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ripk1Q60855 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ripk1Q60855 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ripk1Q60855 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.81□□□□□ -0.2
Ripk1Q60855 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ripk1Q60855 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Ripk1Q60855 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.81□□□□□ -0.2
Ripk1Q60855 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ripk1Q60855 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.81□□□□□ -0.2
Ripk1Q60855 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.81□□□□□ -0.2
Ripk1Q60855 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ripk1Q60855 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ripk1Q60855 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.81□□□□□ -0.2
Ripk1Q60855 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ripk1Q60855 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ripk1Q60855 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ripk1Q60855 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ripk1Q60855 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms