Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1h4Q60641 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.98□□□□□ -0.17
Nr1h4Q60641 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Nr1h4Q60641 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.97□□□□□ -0.17
Nr1h4Q60641 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Gm14859-201ENSMUST00000117752 357 ntBASIC13.97□□□□□ -0.17
Nr1h4Q60641 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.97□□□□□ -0.17
Nr1h4Q60641 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.97□□□□□ -0.17
Nr1h4Q60641 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.97□□□□□ -0.17
Nr1h4Q60641 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Nr1h4Q60641 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.97□□□□□ -0.17
Nr1h4Q60641 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.97□□□□□ -0.17
Nr1h4Q60641 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1h4Q60641 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Mir7071-201ENSMUST00000184847 69 ntBASIC13.96□□□□□ -0.17
Nr1h4Q60641 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.96□□□□□ -0.17
Nr1h4Q60641 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Gm37153-201ENSMUST00000193637 231 ntBASIC13.96□□□□□ -0.17
Nr1h4Q60641 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1h4Q60641 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nr1h4Q60641 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nr1h4Q60641 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nr1h4Q60641 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.96□□□□□ -0.18
Nr1h4Q60641 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nr1h4Q60641 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nr1h4Q60641 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nr1h4Q60641 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Nr1h4Q60641 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nr1h4Q60641 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Nr1h4Q60641 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms