Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-1Q5R1I8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Gm9924-202ENSMUST00000192760 2311 ntBASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-1Q5R1I8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Gm6159-201ENSMUST00000191249 1724 ntBASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Gm13401-201ENSMUST00000117074 291 ntBASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-1Q5R1I8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Trav3-1Q5R1I8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms