Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 AV026068-213ENSMUST00000223675 1171 ntBASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7-2Q5R1I3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7-2Q5R1I3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trav7-2Q5R1I3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7-2Q5R1I3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC10.96□□□□□ -0.66
Trav7-2Q5R1I3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7-2Q5R1I3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7-2Q5R1I3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Trav7-2Q5R1I3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7-2Q5R1I3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gm12134-201ENSMUST00000122109 520 ntBASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-2Q5R1I3 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Gm9682-201ENSMUST00000197505 556 ntBASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 Gm9449-201ENSMUST00000207265 1011 ntBASIC10.94□□□□□ -0.66
Trav7-2Q5R1I3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms