Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Gm10060-201ENSMUST00000212002 111 ntBASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-3Q5R1E6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-3Q5R1E6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav6-3Q5R1E6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms