Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv4Q5R1A3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.12□□□□□ -0.47
Trdv4Q5R1A3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv4Q5R1A3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv4Q5R1A3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv4Q5R1A3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv4Q5R1A3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv4Q5R1A3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Gm16198-201ENSMUST00000118766 670 ntBASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Thap2-203ENSMUST00000218989 527 ntBASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv4Q5R1A3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Gm9727-201ENSMUST00000161387 555 ntBASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trdv4Q5R1A3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Trdv4Q5R1A3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms