Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Gm22323-201ENSMUST00000103832 109 ntBASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps13aQ5H8C4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Gm24514-201ENSMUST00000174961 285 ntBASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Gm16177-201ENSMUST00000120728 718 ntBASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Gm38341-201ENSMUST00000195357 515 ntBASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13aQ5H8C4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Gm13689-201ENSMUST00000119360 685 ntBASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Gm27486-201ENSMUST00000184923 80 ntBASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps13aQ5H8C4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps13aQ5H8C4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps13aQ5H8C4 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps13aQ5H8C4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps13aQ5H8C4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Vps13aQ5H8C4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps13aQ5H8C4 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.27□□□□□ -0.13
Vps13aQ5H8C4 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps13aQ5H8C4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps13aQ5H8C4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps13aQ5H8C4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vps13aQ5H8C4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps13aQ5H8C4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Gm38002-201ENSMUST00000193255 180 ntBASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Gm38266-201ENSMUST00000194931 421 ntBASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13aQ5H8C4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms