Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Gm24543-201ENSMUST00000103867 82 ntBASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rc3h1Q4VGL6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Gm12428-201ENSMUST00000119844 727 ntBASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Gm7775-201ENSMUST00000218871 853 ntBASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rc3h1Q4VGL6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Mir1897-201ENSMUST00000122581 272 ntBASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Gm27631-201ENSMUST00000184163 466 ntBASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Gm44344-201ENSMUST00000200287 129 ntBASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Gm9182-201ENSMUST00000217829 639 ntBASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms