Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-3Q3UHX8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkx6-3Q3UHX8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-3Q3UHX8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-3Q3UHX8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-3Q3UHX8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-3Q3UHX8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Nkx6-3Q3UHX8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Nkx6-3Q3UHX8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx6-3Q3UHX8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-3Q3UHX8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Gm44872-201ENSMUST00000207864 420 ntBASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx6-3Q3UHX8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm29310-201ENSMUST00000185468 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm21825-201ENSMUST00000185728 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm29109-201ENSMUST00000185895 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm21896-201ENSMUST00000186520 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm21873-201ENSMUST00000186728 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm21794-201ENSMUST00000187056 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm21880-201ENSMUST00000187275 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm21826-201ENSMUST00000187451 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm21198-201ENSMUST00000188393 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm21749-201ENSMUST00000189343 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm21901-201ENSMUST00000189568 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm29424-201ENSMUST00000189716 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm28599-201ENSMUST00000189838 694 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm21867-201ENSMUST00000189917 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm29269-201ENSMUST00000190087 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm21722-201ENSMUST00000190153 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm28423-201ENSMUST00000190701 696 ntBASIC13.81□□□□□ -0.2
Nkx6-3Q3UHX8 Gm21899-201ENSMUST00000190745 696 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms