Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Gm9726-201ENSMUST00000180321 678 ntBASIC13.81□□□□□ -0.2
Brf2Q3UAW9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Psmb5-202ENSMUST00000227257 622 ntBASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Brf2Q3UAW9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Gm23547-201ENSMUST00000158210 271 ntBASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Gm5177-201ENSMUST00000183092 997 ntBASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf2Q3UAW9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms