Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc4Q3TCX3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Khdc4Q3TCX3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc4Q3TCX3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Khdc4Q3TCX3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc4Q3TCX3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc4Q3TCX3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc4Q3TCX3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc4Q3TCX3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc4Q3TCX3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc4Q3TCX3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc4Q3TCX3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Gm22175-201ENSMUST00000175007 78 ntBASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Gm7774-201ENSMUST00000200064 533 ntBASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc4Q3TCX3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Khdc4Q3TCX3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Khdc4Q3TCX3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Khdc4Q3TCX3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Khdc4Q3TCX3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Khdc4Q3TCX3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Khdc4Q3TCX3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Khdc4Q3TCX3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Khdc4Q3TCX3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Gm27321-201ENSMUST00000185021 205 ntBASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Khdc4Q3TCX3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Khdc4Q3TCX3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms