Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cul4aQ3TCH7 Gm2272-201ENSMUST00000194903 582 ntBASIC15.41■□□□□ 0.06
Cul4aQ3TCH7 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.41■□□□□ 0.06
Cul4aQ3TCH7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cul4aQ3TCH7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.41■□□□□ 0.06
Cul4aQ3TCH7 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.41■□□□□ 0.06
Cul4aQ3TCH7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cul4aQ3TCH7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cul4aQ3TCH7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cul4aQ3TCH7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cul4aQ3TCH7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cul4aQ3TCH7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Gm27300-201ENSMUST00000184085 97 ntBASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Gm27335-201ENSMUST00000184758 97 ntBASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cul4aQ3TCH7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cul4aQ3TCH7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.38■□□□□ 0.05
Cul4aQ3TCH7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cul4aQ3TCH7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cul4aQ3TCH7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cul4aQ3TCH7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cul4aQ3TCH7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cul4aQ3TCH7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Cul4aQ3TCH7 Gm14042-201ENSMUST00000120139 833 ntBASIC15.37■□□□□ 0.05
Cul4aQ3TCH7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cul4aQ3TCH7 Gm13597-201ENSMUST00000121239 375 ntBASIC15.37■□□□□ 0.05
Cul4aQ3TCH7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms