Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Gm27516-201ENSMUST00000184237 98 ntBASIC10.61□□□□□ -0.71
Hspg2Q05793 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.61□□□□□ -0.71
Hspg2Q05793 Gm18054-201ENSMUST00000207539 555 ntBASIC10.61□□□□□ -0.71
Hspg2Q05793 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.61□□□□□ -0.71
Hspg2Q05793 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Hspg2Q05793 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.6□□□□□ -0.71
Hspg2Q05793 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Hspg2Q05793 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.6□□□□□ -0.71
Hspg2Q05793 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Hspg2Q05793 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Gm7593-201ENSMUST00000187246 644 ntBASIC10.6□□□□□ -0.71
Hspg2Q05793 Gm19309-201ENSMUST00000218295 205 ntBASIC10.6□□□□□ -0.71
Hspg2Q05793 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.6□□□□□ -0.71
Hspg2Q05793 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Hspg2Q05793 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Hspg2Q05793 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Gm43118-201ENSMUST00000199149 775 ntBASIC10.6□□□□□ -0.71
Hspg2Q05793 Gm45930-201ENSMUST00000221330 292 ntBASIC10.6□□□□□ -0.71
Hspg2Q05793 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hspg2Q05793 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Hspg2Q05793 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Hspg2Q05793 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.59□□□□□ -0.71
Hspg2Q05793 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Hspg2Q05793 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.59□□□□□ -0.71
Hspg2Q05793 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Hspg2Q05793 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Hspg2Q05793 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.59□□□□□ -0.71
Hspg2Q05793 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.59□□□□□ -0.71
Hspg2Q05793 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.59□□□□□ -0.71
Hspg2Q05793 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hspg2Q05793 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Hspg2Q05793 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.58□□□□□ -0.72
Hspg2Q05793 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.58□□□□□ -0.72
Hspg2Q05793 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Hspg2Q05793 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.58□□□□□ -0.72
Hspg2Q05793 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.58□□□□□ -0.72
Hspg2Q05793 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.58□□□□□ -0.72
Hspg2Q05793 Gm17794-201ENSMUST00000220252 955 ntBASIC10.58□□□□□ -0.72
Hspg2Q05793 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms