Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx3-2P97503 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.87□□□□□ -0.19
Nkx3-2P97503 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.87□□□□□ -0.19
Nkx3-2P97503 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nkx3-2P97503 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.86□□□□□ -0.19
Nkx3-2P97503 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Mir449b-201ENSMUST00000104833 80 ntBASIC13.86□□□□□ -0.19
Nkx3-2P97503 Gm2810-201ENSMUST00000118681 990 ntBASIC13.86□□□□□ -0.19
Nkx3-2P97503 Gm11543-201ENSMUST00000120758 370 ntBASIC13.86□□□□□ -0.19
Nkx3-2P97503 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Mir6956-201ENSMUST00000183598 62 ntBASIC13.86□□□□□ -0.19
Nkx3-2P97503 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx3-2P97503 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.86□□□□□ -0.19
Nkx3-2P97503 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx3-2P97503 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms