Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps45P97390 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps45P97390 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps45P97390 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps45P97390 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps45P97390 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps45P97390 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps45P97390 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps45P97390 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps45P97390 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.15■□□□□ 0.02
Vps45P97390 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vps45P97390 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.15■□□□□ 0.02
Vps45P97390 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.15■□□□□ 0.02
Vps45P97390 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.15■□□□□ 0.02
Vps45P97390 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.15■□□□□ 0.02
Vps45P97390 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.15■□□□□ 0.02
Vps45P97390 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.15■□□□□ 0.02
Vps45P97390 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps45P97390 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Vps45P97390 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Vps45P97390 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vps45P97390 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps45P97390 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps45P97390 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps45P97390 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.14■□□□□ 0.01
Vps45P97390 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Gm9385-201ENSMUST00000117563 472 ntBASIC15.14■□□□□ 0.01
Vps45P97390 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps45P97390 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vps45P97390 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps45P97390 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Gm7774-201ENSMUST00000200064 533 ntBASIC15.14■□□□□ 0.01
Vps45P97390 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps45P97390 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vps45P97390 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps45P97390 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Vps45P97390 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps45P97390 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.13■□□□□ 0.01
Vps45P97390 Gm12428-201ENSMUST00000119844 727 ntBASIC15.13■□□□□ 0.01
Vps45P97390 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Gm16026-204ENSMUST00000162652 683 ntBASIC15.13■□□□□ 0.01
Vps45P97390 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps45P97390 Gm27622-201ENSMUST00000183779 60 ntBASIC15.13■□□□□ 0.01
Vps45P97390 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.13■□□□□ 0.01
Vps45P97390 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vps45P97390 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps45P97390 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps45P97390 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps45P97390 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps45P97390 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps45P97390 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms