Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh6P97326 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh6P97326 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh6P97326 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh6P97326 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cdh6P97326 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdh6P97326 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh6P97326 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh6P97326 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdh6P97326 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdh6P97326 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdh6P97326 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Cdh6P97326 Gm5479-201ENSMUST00000160578 435 ntBASIC14.86□□□□□ -0.03
Cdh6P97326 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.86□□□□□ -0.03
Cdh6P97326 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.86□□□□□ -0.03
Cdh6P97326 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.86□□□□□ -0.03
Cdh6P97326 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.86□□□□□ -0.03
Cdh6P97326 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cdh6P97326 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cdh6P97326 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.86□□□□□ -0.03
Cdh6P97326 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Cdh6P97326 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cdh6P97326 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh6P97326 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.85□□□□□ -0.03
Cdh6P97326 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdh6P97326 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdh6P97326 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdh6P97326 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdh6P97326 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Cdh6P97326 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cdh6P97326 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdh6P97326 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.85□□□□□ -0.03
Cdh6P97326 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.85□□□□□ -0.03
Cdh6P97326 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.85□□□□□ -0.03
Cdh6P97326 Gm11745-201ENSMUST00000121669 448 ntBASIC14.85□□□□□ -0.03
Cdh6P97326 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.85□□□□□ -0.03
Cdh6P97326 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.85□□□□□ -0.03
Cdh6P97326 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.85□□□□□ -0.03
Cdh6P97326 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.85□□□□□ -0.03
Cdh6P97326 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdh6P97326 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cdh6P97326 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cdh6P97326 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdh6P97326 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cdh6P97326 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh6P97326 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cdh6P97326 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdh6P97326 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdh6P97326 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.84□□□□□ -0.03
Cdh6P97326 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Cdh6P97326 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdh6P97326 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdh6P97326 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cdh6P97326 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.84□□□□□ -0.03
Cdh6P97326 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdh6P97326 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh6P97326 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms