Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gbx1P82976 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Gbx1P82976 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gbx1P82976 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gbx1P82976 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gbx1P82976 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gbx1P82976 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Gbx1P82976 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Gbx1P82976 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.78□□□□□ -0.2
Gbx1P82976 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Gbx1P82976 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Gbx1P82976 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.78□□□□□ -0.2
Gbx1P82976 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.78□□□□□ -0.2
Gbx1P82976 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Gbx1P82976 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.78□□□□□ -0.2
Gbx1P82976 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Gbx1P82976 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.78□□□□□ -0.2
Gbx1P82976 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.78□□□□□ -0.2
Gbx1P82976 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.78□□□□□ -0.2
Gbx1P82976 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.78□□□□□ -0.2
Gbx1P82976 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gbx1P82976 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gbx1P82976 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.77□□□□□ -0.2
Gbx1P82976 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gbx1P82976 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.77□□□□□ -0.21
Gbx1P82976 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Gbx1P82976 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.77□□□□□ -0.21
Gbx1P82976 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.77□□□□□ -0.21
Gbx1P82976 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.77□□□□□ -0.21
Gbx1P82976 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.77□□□□□ -0.21
Gbx1P82976 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.77□□□□□ -0.21
Gbx1P82976 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.77□□□□□ -0.21
Gbx1P82976 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Gbx1P82976 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Gbx1P82976 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gbx1P82976 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Gbx1P82976 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Gbx1P82976 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Gbx1P82976 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Gbx1P82976 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.76□□□□□ -0.21
Gbx1P82976 Gm12350-201ENSMUST00000121208 462 ntBASIC13.76□□□□□ -0.21
Gbx1P82976 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
Gbx1P82976 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.76□□□□□ -0.21
Gbx1P82976 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Gbx1P82976 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Gbx1P82976 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Gbx1P82976 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms