Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.61□□□□□ -0.23
SgcdP82347 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SgcdP82347 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SgcdP82347 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SgcdP82347 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SgcdP82347 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SgcdP82347 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.61□□□□□ -0.23
SgcdP82347 Gm11594-201ENSMUST00000122313 162 ntBASIC13.61□□□□□ -0.23
SgcdP82347 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.61□□□□□ -0.23
SgcdP82347 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.61□□□□□ -0.23
SgcdP82347 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.61□□□□□ -0.23
SgcdP82347 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.61□□□□□ -0.23
SgcdP82347 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.61□□□□□ -0.23
SgcdP82347 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.61□□□□□ -0.23
SgcdP82347 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
SgcdP82347 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SgcdP82347 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
SgcdP82347 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SgcdP82347 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcdP82347 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.61□□□□□ -0.23
SgcdP82347 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SgcdP82347 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SgcdP82347 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.6□□□□□ -0.23
SgcdP82347 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SgcdP82347 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.6□□□□□ -0.23
SgcdP82347 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SgcdP82347 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
SgcdP82347 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SgcdP82347 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.6□□□□□ -0.23
SgcdP82347 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.6□□□□□ -0.23
SgcdP82347 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SgcdP82347 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcdP82347 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.59□□□□□ -0.23
SgcdP82347 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
SgcdP82347 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
SgcdP82347 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SgcdP82347 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
SgcdP82347 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.59□□□□□ -0.23
SgcdP82347 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SgcdP82347 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 Gm1401-201ENSMUST00000122048 772 ntBASIC13.59□□□□□ -0.23
SgcdP82347 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 Mir5131-201ENSMUST00000175426 93 ntBASIC13.59□□□□□ -0.23
SgcdP82347 Gm8000-201ENSMUST00000188378 592 ntBASIC13.59□□□□□ -0.23
SgcdP82347 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcdP82347 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.59□□□□□ -0.23
SgcdP82347 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms