Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm5P62322 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm5P62322 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm5P62322 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm5P62322 Gm22697-201ENSMUST00000175194 63 ntBASIC12.23□□□□□ -0.45
Lsm5P62322 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm5P62322 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.23□□□□□ -0.45
Lsm5P62322 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Lsm5P62322 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.23□□□□□ -0.45
Lsm5P62322 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lsm5P62322 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.23□□□□□ -0.45
Lsm5P62322 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lsm5P62322 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.22□□□□□ -0.45
Lsm5P62322 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Lsm5P62322 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Lsm5P62322 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lsm5P62322 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Lsm5P62322 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm5P62322 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm5P62322 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm5P62322 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.21□□□□□ -0.45
Lsm5P62322 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lsm5P62322 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lsm5P62322 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Lsm5P62322 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm5P62322 Gm6623-201ENSMUST00000173570 544 ntBASIC12.21□□□□□ -0.45
Lsm5P62322 Gm37055-201ENSMUST00000191866 133 ntBASIC12.21□□□□□ -0.45
Lsm5P62322 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.21□□□□□ -0.45
Lsm5P62322 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.21□□□□□ -0.45
Lsm5P62322 Gm9172-201ENSMUST00000212092 954 ntBASIC12.21□□□□□ -0.45
Lsm5P62322 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.21□□□□□ -0.45
Lsm5P62322 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.21□□□□□ -0.45
Lsm5P62322 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm5P62322 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms