Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.32□□□□□ -0.28
Vbp1P61759 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Vbp1P61759 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.32□□□□□ -0.28
Vbp1P61759 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
Vbp1P61759 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.32□□□□□ -0.28
Vbp1P61759 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.32□□□□□ -0.28
Vbp1P61759 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vbp1P61759 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vbp1P61759 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vbp1P61759 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vbp1P61759 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vbp1P61759 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Vbp1P61759 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vbp1P61759 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vbp1P61759 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.31□□□□□ -0.28
Vbp1P61759 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.31□□□□□ -0.28
Vbp1P61759 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vbp1P61759 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vbp1P61759 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Vbp1P61759 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.31□□□□□ -0.28
Vbp1P61759 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.31□□□□□ -0.28
Vbp1P61759 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.31□□□□□ -0.28
Vbp1P61759 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.31□□□□□ -0.28
Vbp1P61759 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vbp1P61759 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.31□□□□□ -0.28
Vbp1P61759 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.31□□□□□ -0.28
Vbp1P61759 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vbp1P61759 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vbp1P61759 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Vbp1P61759 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vbp1P61759 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vbp1P61759 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.3□□□□□ -0.28
Vbp1P61759 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Vbp1P61759 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.3□□□□□ -0.28
Vbp1P61759 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Vbp1P61759 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.3□□□□□ -0.28
Vbp1P61759 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vbp1P61759 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vbp1P61759 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.3□□□□□ -0.28
Vbp1P61759 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Vbp1P61759 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.3□□□□□ -0.28
Vbp1P61759 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vbp1P61759 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vbp1P61759 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Vbp1P61759 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms