Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nphp4P59240 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC19.69■□□□□ 0.74
Nphp4P59240 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nphp4P59240 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC19.69■□□□□ 0.74
Nphp4P59240 AC139580.1-202ENSMUST00000223574 928 ntBASIC19.69■□□□□ 0.74
Nphp4P59240 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nphp4P59240 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Gm14452-201ENSMUST00000118680 1632 ntBASIC19.69■□□□□ 0.74
Nphp4P59240 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nphp4P59240 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nphp4P59240 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.68■□□□□ 0.74
Nphp4P59240 Gm37917-201ENSMUST00000194711 392 ntBASIC19.68■□□□□ 0.74
Nphp4P59240 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC19.68■□□□□ 0.74
Nphp4P59240 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Nphp4P59240 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nphp4P59240 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nphp4P59240 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.68■□□□□ 0.74
Nphp4P59240 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nphp4P59240 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Nphp4P59240 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nphp4P59240 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nphp4P59240 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Nphp4P59240 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Nphp4P59240 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Nphp4P59240 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nphp4P59240 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Nphp4P59240 Ighv8-14-201ENSMUST00000196781 358 ntBASIC19.68■□□□□ 0.74
Nphp4P59240 Gm18018-201ENSMUST00000198273 408 ntBASIC19.68■□□□□ 0.74
Nphp4P59240 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC19.68■□□□□ 0.74
Nphp4P59240 AC165157.4-201ENSMUST00000220587 139 ntBASIC19.68■□□□□ 0.74
Nphp4P59240 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nphp4P59240 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nphp4P59240 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nphp4P59240 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Nphp4P59240 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.67■□□□□ 0.74
Nphp4P59240 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nphp4P59240 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nphp4P59240 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Nphp4P59240 Gm15240-201ENSMUST00000118156 720 ntBASIC19.67■□□□□ 0.74
Nphp4P59240 Gm12138-201ENSMUST00000122180 951 ntBASIC19.67■□□□□ 0.74
Nphp4P59240 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC19.67■□□□□ 0.74
Nphp4P59240 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC19.67■□□□□ 0.74
Nphp4P59240 Gm23984-201ENSMUST00000157139 203 ntBASIC19.67■□□□□ 0.74
Nphp4P59240 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Gm6283-201ENSMUST00000182369 1000 ntBASIC19.67■□□□□ 0.74
Nphp4P59240 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nphp4P59240 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.67■□□□□ 0.74
Nphp4P59240 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nphp4P59240 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nphp4P59240 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nphp4P59240 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nphp4P59240 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Nphp4P59240 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC19.66■□□□□ 0.74
Nphp4P59240 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC19.66■□□□□ 0.74
Nphp4P59240 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nphp4P59240 Gm37714-201ENSMUST00000194742 342 ntBASIC19.66■□□□□ 0.74
Nphp4P59240 AC139350.3-201ENSMUST00000226151 420 ntBASIC19.66■□□□□ 0.74
Nphp4P59240 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms