Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tpm1P58771 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tpm1P58771 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tpm1P58771 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.38■□□□□ 0.21
Tpm1P58771 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.38■□□□□ 0.21
Tpm1P58771 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Tpm1P58771 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.38■□□□□ 0.21
Tpm1P58771 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.38■□□□□ 0.21
Tpm1P58771 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.38■□□□□ 0.21
Tpm1P58771 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.38■□□□□ 0.21
Tpm1P58771 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.38■□□□□ 0.21
Tpm1P58771 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Tpm1P58771 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.38■□□□□ 0.21
Tpm1P58771 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.38■□□□□ 0.21
Tpm1P58771 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Tpm1P58771 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpm1P58771 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Tpm1P58771 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Tpm1P58771 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Tpm1P58771 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Tpm1P58771 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.37■□□□□ 0.21
Tpm1P58771 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Tpm1P58771 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Tpm1P58771 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Tpm1P58771 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Gm8097-201ENSMUST00000117903 829 ntBASIC16.37■□□□□ 0.21
Tpm1P58771 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.37■□□□□ 0.21
Tpm1P58771 Gm10499-201ENSMUST00000174094 934 ntBASIC16.37■□□□□ 0.21
Tpm1P58771 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.37■□□□□ 0.21
Tpm1P58771 Gm43767-201ENSMUST00000198933 381 ntBASIC16.37■□□□□ 0.21
Tpm1P58771 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Tpm1P58771 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Tpm1P58771 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Tpm1P58771 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.37■□□□□ 0.21
Tpm1P58771 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.37■□□□□ 0.21
Tpm1P58771 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tpm1P58771 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Carlr-201ENSMUST00000181515 2574 ntBASIC16.36■□□□□ 0.21
Tpm1P58771 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Tpm1P58771 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.36■□□□□ 0.21
Tpm1P58771 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.36■□□□□ 0.21
Tpm1P58771 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Gm6659-201ENSMUST00000174752 547 ntBASIC16.36■□□□□ 0.21
Tpm1P58771 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tpm1P58771 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms