Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd3P55096 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd3P55096 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd3P55096 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd3P55096 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Abcd3P55096 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.12□□□□□ -0.31
Abcd3P55096 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.12□□□□□ -0.31
Abcd3P55096 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Gm1401-201ENSMUST00000122048 772 ntBASIC13.12□□□□□ -0.31
Abcd3P55096 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Abcd3P55096 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.12□□□□□ -0.31
Abcd3P55096 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.12□□□□□ -0.31
Abcd3P55096 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Gm27301-201ENSMUST00000184012 127 ntBASIC13.12□□□□□ -0.31
Abcd3P55096 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.12□□□□□ -0.31
Abcd3P55096 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.12□□□□□ -0.31
Abcd3P55096 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.12□□□□□ -0.31
Abcd3P55096 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.12□□□□□ -0.31
Abcd3P55096 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Abcd3P55096 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd3P55096 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Abcd3P55096 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.11□□□□□ -0.31
Abcd3P55096 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Abcd3P55096 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.11□□□□□ -0.31
Abcd3P55096 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Abcd3P55096 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.11□□□□□ -0.31
Abcd3P55096 Gm17968-201ENSMUST00000194902 784 ntBASIC13.11□□□□□ -0.31
Abcd3P55096 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.11□□□□□ -0.31
Abcd3P55096 Olfr286-202ENSMUST00000205305 969 ntBASIC13.11□□□□□ -0.31
Abcd3P55096 Gm45747-201ENSMUST00000212203 999 ntBASIC13.11□□□□□ -0.31
Abcd3P55096 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Abcd3P55096 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.11□□□□□ -0.31
Abcd3P55096 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.11□□□□□ -0.31
Abcd3P55096 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Abcd3P55096 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abcd3P55096 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abcd3P55096 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Abcd3P55096 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Abcd3P55096 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abcd3P55096 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abcd3P55096 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abcd3P55096 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abcd3P55096 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abcd3P55096 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abcd3P55096 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abcd3P55096 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.1□□□□□ -0.31
Abcd3P55096 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abcd3P55096 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.1□□□□□ -0.31
Abcd3P55096 Gm9727-201ENSMUST00000161387 555 ntBASIC13.1□□□□□ -0.31
Abcd3P55096 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abcd3P55096 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.1□□□□□ -0.31
Abcd3P55096 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.1□□□□□ -0.31
Abcd3P55096 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms