Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NcanP55066 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.32■□□□□ 0.04
NcanP55066 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.32■□□□□ 0.04
NcanP55066 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.32■□□□□ 0.04
NcanP55066 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.32■□□□□ 0.04
NcanP55066 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.32■□□□□ 0.04
NcanP55066 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
NcanP55066 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
NcanP55066 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NcanP55066 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NcanP55066 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NcanP55066 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NcanP55066 Gm29649-201ENSMUST00000185649 419 ntBASIC15.31■□□□□ 0.04
NcanP55066 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.31■□□□□ 0.04
NcanP55066 Gm40466-201ENSMUST00000212174 422 ntBASIC15.31■□□□□ 0.04
NcanP55066 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.31■□□□□ 0.04
NcanP55066 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.31■□□□□ 0.04
NcanP55066 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NcanP55066 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
NcanP55066 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NcanP55066 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 Gm14263-201ENSMUST00000117955 746 ntBASIC15.3■□□□□ 0.04
NcanP55066 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 Gm26083-201ENSMUST00000157904 193 ntBASIC15.3■□□□□ 0.04
NcanP55066 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.3■□□□□ 0.04
NcanP55066 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.3■□□□□ 0.04
NcanP55066 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NcanP55066 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.3■□□□□ 0.04
NcanP55066 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NcanP55066 Gm9726-201ENSMUST00000180321 678 ntBASIC15.3■□□□□ 0.04
NcanP55066 Gm27514-201ENSMUST00000183692 110 ntBASIC15.3■□□□□ 0.04
NcanP55066 Gm5370-201ENSMUST00000187187 574 ntBASIC15.3■□□□□ 0.04
NcanP55066 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.3■□□□□ 0.04
NcanP55066 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NcanP55066 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NcanP55066 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NcanP55066 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NcanP55066 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.29■□□□□ 0.04
NcanP55066 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.29■□□□□ 0.04
NcanP55066 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NcanP55066 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.29■□□□□ 0.04
NcanP55066 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.29■□□□□ 0.04
NcanP55066 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NcanP55066 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NcanP55066 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms