Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm8602-201ENSMUST00000184045 607 ntBASIC18.48■□□□□ 0.55
Msh6P54276 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Msh6P54276 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Msh6P54276 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.48■□□□□ 0.55
Msh6P54276 Gm18624-201ENSMUST00000220966 658 ntBASIC18.48■□□□□ 0.55
Msh6P54276 Gm9229-201ENSMUST00000222777 126 ntBASIC18.48■□□□□ 0.55
Msh6P54276 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Msh6P54276 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.47■□□□□ 0.55
Msh6P54276 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.47■□□□□ 0.55
Msh6P54276 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Gm9182-201ENSMUST00000217829 639 ntBASIC18.47■□□□□ 0.55
Msh6P54276 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Msh6P54276 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.47■□□□□ 0.55
Msh6P54276 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Msh6P54276 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Msh6P54276 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Msh6P54276 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh6P54276 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Msh6P54276 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh6P54276 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
Msh6P54276 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh6P54276 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh6P54276 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh6P54276 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Msh6P54276 Gm10766-202ENSMUST00000194123 606 ntBASIC18.46■□□□□ 0.55
Msh6P54276 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh6P54276 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh6P54276 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh6P54276 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh6P54276 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh6P54276 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh6P54276 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Msh6P54276 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Msh6P54276 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.46■□□□□ 0.54
Msh6P54276 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Msh6P54276 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Msh6P54276 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msh6P54276 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Msh6P54276 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh6P54276 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh6P54276 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msh6P54276 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.45■□□□□ 0.54
Msh6P54276 Gm13829-201ENSMUST00000119600 138 ntBASIC18.45■□□□□ 0.54
Msh6P54276 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.45■□□□□ 0.54
Msh6P54276 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Msh6P54276 Gm10275-202ENSMUST00000168697 495 ntBASIC18.45■□□□□ 0.54
Msh6P54276 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC18.45■□□□□ 0.54
Msh6P54276 Gm18062-201ENSMUST00000208020 547 ntBASIC18.45■□□□□ 0.54
Msh6P54276 Gm18055-201ENSMUST00000208254 547 ntBASIC18.45■□□□□ 0.54
Msh6P54276 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh6P54276 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.45■□□□□ 0.54
Msh6P54276 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh6P54276 Gm10275-201ENSMUST00000092620 635 ntBASIC18.45■□□□□ 0.54
Msh6P54276 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh6P54276 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msh6P54276 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh6P54276 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.45■□□□□ 0.54
Msh6P54276 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Msh6P54276 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh6P54276 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.44■□□□□ 0.54
Msh6P54276 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.44■□□□□ 0.54
Msh6P54276 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.44■□□□□ 0.54
Msh6P54276 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.44■□□□□ 0.54
Msh6P54276 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.44■□□□□ 0.54
Msh6P54276 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms