Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox3P53784 Mir8102-201ENSMUST00000184148 139 ntBASIC14.08□□□□□ -0.16
Sox3P53784 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox3P53784 Gm18187-201ENSMUST00000196476 984 ntBASIC14.08□□□□□ -0.16
Sox3P53784 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.08□□□□□ -0.16
Sox3P53784 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox3P53784 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Sox3P53784 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sox3P53784 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.08□□□□□ -0.16
Sox3P53784 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox3P53784 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Sox3P53784 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.07□□□□□ -0.16
Sox3P53784 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.07□□□□□ -0.16
Sox3P53784 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sox3P53784 Gm18057-201ENSMUST00000208220 503 ntBASIC14.07□□□□□ -0.16
Sox3P53784 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.07□□□□□ -0.16
Sox3P53784 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox3P53784 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Sox3P53784 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox3P53784 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Sox3P53784 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
Sox3P53784 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.06□□□□□ -0.16
Sox3P53784 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sox3P53784 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Sox3P53784 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.06□□□□□ -0.16
Sox3P53784 Gm15693-201ENSMUST00000120470 637 ntBASIC14.06□□□□□ -0.16
Sox3P53784 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Sox3P53784 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.06□□□□□ -0.16
Sox3P53784 Gm43433-201ENSMUST00000196573 481 ntBASIC14.06□□□□□ -0.16
Sox3P53784 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.06□□□□□ -0.16
Sox3P53784 Gm5779-201ENSMUST00000218467 910 ntBASIC14.06□□□□□ -0.16
Sox3P53784 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.06□□□□□ -0.16
Sox3P53784 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sox3P53784 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Sox3P53784 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox3P53784 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.06□□□□□ -0.16
Sox3P53784 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sox3P53784 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.05□□□□□ -0.16
Sox3P53784 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms