Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atoh1P48985 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.46■□□□□ 0.23
Atoh1P48985 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.46■□□□□ 0.23
Atoh1P48985 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atoh1P48985 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.46■□□□□ 0.23
Atoh1P48985 Gm17795-201ENSMUST00000214505 757 ntBASIC16.46■□□□□ 0.23
Atoh1P48985 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atoh1P48985 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.46■□□□□ 0.23
Atoh1P48985 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atoh1P48985 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atoh1P48985 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atoh1P48985 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atoh1P48985 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atoh1P48985 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atoh1P48985 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Atoh1P48985 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.46■□□□□ 0.22
Atoh1P48985 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Atoh1P48985 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.45■□□□□ 0.22
Atoh1P48985 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.45■□□□□ 0.22
Atoh1P48985 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.45■□□□□ 0.22
Atoh1P48985 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Atoh1P48985 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.45■□□□□ 0.22
Atoh1P48985 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Atoh1P48985 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.45■□□□□ 0.22
Atoh1P48985 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.45■□□□□ 0.22
Atoh1P48985 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Atoh1P48985 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Atoh1P48985 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.45■□□□□ 0.22
Atoh1P48985 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.45■□□□□ 0.22
Atoh1P48985 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Atoh1P48985 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.45■□□□□ 0.22
Atoh1P48985 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Atoh1P48985 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
Atoh1P48985 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atoh1P48985 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Atoh1P48985 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.44■□□□□ 0.22
Atoh1P48985 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.44■□□□□ 0.22
Atoh1P48985 Gm10275-202ENSMUST00000168697 495 ntBASIC16.44■□□□□ 0.22
Atoh1P48985 Gm21470-201ENSMUST00000187680 696 ntBASIC16.44■□□□□ 0.22
Atoh1P48985 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.44■□□□□ 0.22
Atoh1P48985 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.44■□□□□ 0.22
Atoh1P48985 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Atoh1P48985 Gm10275-201ENSMUST00000092620 635 ntBASIC16.44■□□□□ 0.22
Atoh1P48985 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Atoh1P48985 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atoh1P48985 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Atoh1P48985 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Atoh1P48985 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Atoh1P48985 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.43■□□□□ 0.22
Atoh1P48985 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.43■□□□□ 0.22
Atoh1P48985 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.43■□□□□ 0.22
Atoh1P48985 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.43■□□□□ 0.22
Atoh1P48985 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.43■□□□□ 0.22
Atoh1P48985 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.43■□□□□ 0.22
Atoh1P48985 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Atoh1P48985 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Atoh1P48985 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms