Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
GdnfP48540 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GdnfP48540 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.88□□□□□ -0.35
GdnfP48540 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.88□□□□□ -0.35
GdnfP48540 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GdnfP48540 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.88□□□□□ -0.35
GdnfP48540 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GdnfP48540 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
GdnfP48540 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.87□□□□□ -0.35
GdnfP48540 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.87□□□□□ -0.35
GdnfP48540 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.87□□□□□ -0.35
GdnfP48540 Gm8344-201ENSMUST00000119813 856 ntBASIC12.87□□□□□ -0.35
GdnfP48540 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.87□□□□□ -0.35
GdnfP48540 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.87□□□□□ -0.35
GdnfP48540 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.87□□□□□ -0.35
GdnfP48540 Gm6376-201ENSMUST00000209407 580 ntBASIC12.87□□□□□ -0.35
GdnfP48540 Gm19164-201ENSMUST00000210667 640 ntBASIC12.87□□□□□ -0.35
GdnfP48540 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.87□□□□□ -0.35
GdnfP48540 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.87□□□□□ -0.35
GdnfP48540 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.87□□□□□ -0.35
GdnfP48540 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
GdnfP48540 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
GdnfP48540 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
GdnfP48540 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GdnfP48540 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
GdnfP48540 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.86□□□□□ -0.35
GdnfP48540 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
GdnfP48540 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.86□□□□□ -0.35
GdnfP48540 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
GdnfP48540 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
GdnfP48540 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.86□□□□□ -0.35
GdnfP48540 Gm25990-201ENSMUST00000102440 86 ntBASIC12.86□□□□□ -0.35
GdnfP48540 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Gm13884-201ENSMUST00000118103 829 ntBASIC12.86□□□□□ -0.35
GdnfP48540 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.86□□□□□ -0.35
GdnfP48540 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.86□□□□□ -0.35
GdnfP48540 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.86□□□□□ -0.35
GdnfP48540 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
GdnfP48540 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
GdnfP48540 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
GdnfP48540 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.86□□□□□ -0.35
GdnfP48540 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
GdnfP48540 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.86□□□□□ -0.35
GdnfP48540 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
GdnfP48540 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.86□□□□□ -0.35
GdnfP48540 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
GdnfP48540 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.86□□□□□ -0.35
GdnfP48540 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GdnfP48540 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
GdnfP48540 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
GdnfP48540 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.85□□□□□ -0.35
GdnfP48540 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms