Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.77□□□□□ -0.21
Sox2P48432 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox2P48432 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox2P48432 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sox2P48432 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Sox2P48432 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sox2P48432 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox2P48432 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox2P48432 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox2P48432 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox2P48432 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sox2P48432 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.76□□□□□ -0.21
Sox2P48432 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sox2P48432 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox2P48432 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Sox2P48432 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Sox2P48432 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.76□□□□□ -0.21
Sox2P48432 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.76□□□□□ -0.21
Sox2P48432 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox2P48432 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sox2P48432 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox2P48432 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Sox2P48432 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
Sox2P48432 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sox2P48432 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Gm12644-201ENSMUST00000119935 606 ntBASIC13.75□□□□□ -0.21
Sox2P48432 Gm12895-201ENSMUST00000122214 226 ntBASIC13.75□□□□□ -0.21
Sox2P48432 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox2P48432 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox2P48432 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox2P48432 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.74□□□□□ -0.21
Sox2P48432 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox2P48432 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox2P48432 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox2P48432 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox2P48432 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox2P48432 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox2P48432 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox2P48432 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox2P48432 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox2P48432 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms