Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.15□□□□□ -0.14
Rph3aP47708 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.15□□□□□ -0.14
Rph3aP47708 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.15□□□□□ -0.14
Rph3aP47708 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.15□□□□□ -0.14
Rph3aP47708 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rph3aP47708 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rph3aP47708 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rph3aP47708 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.15□□□□□ -0.14
Rph3aP47708 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rph3aP47708 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Gm16026-204ENSMUST00000162652 683 ntBASIC14.15□□□□□ -0.14
Rph3aP47708 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.15□□□□□ -0.14
Rph3aP47708 Gm44492-201ENSMUST00000197012 141 ntBASIC14.15□□□□□ -0.14
Rph3aP47708 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.15□□□□□ -0.14
Rph3aP47708 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.15□□□□□ -0.14
Rph3aP47708 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.15□□□□□ -0.14
Rph3aP47708 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.15□□□□□ -0.14
Rph3aP47708 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rph3aP47708 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rph3aP47708 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Rph3aP47708 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rph3aP47708 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.14□□□□□ -0.15
Rph3aP47708 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.14□□□□□ -0.15
Rph3aP47708 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.14□□□□□ -0.15
Rph3aP47708 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rph3aP47708 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rph3aP47708 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Rph3aP47708 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rph3aP47708 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.13□□□□□ -0.15
Rph3aP47708 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rph3aP47708 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rph3aP47708 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.13□□□□□ -0.15
Rph3aP47708 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.13□□□□□ -0.15
Rph3aP47708 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rph3aP47708 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.13□□□□□ -0.15
Rph3aP47708 Gm12134-201ENSMUST00000122109 520 ntBASIC14.13□□□□□ -0.15
Rph3aP47708 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Gm17271-201ENSMUST00000165535 355 ntBASIC14.13□□□□□ -0.15
Rph3aP47708 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.13□□□□□ -0.15
Rph3aP47708 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.13□□□□□ -0.15
Rph3aP47708 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rph3aP47708 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rph3aP47708 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rph3aP47708 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms