Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Gm8410-201ENSMUST00000117225 605 ntBASIC13.87□□□□□ -0.19
Nkx2-6P43688 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.87□□□□□ -0.19
Nkx2-6P43688 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.87□□□□□ -0.19
Nkx2-6P43688 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.87□□□□□ -0.19
Nkx2-6P43688 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.87□□□□□ -0.19
Nkx2-6P43688 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.87□□□□□ -0.19
Nkx2-6P43688 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.87□□□□□ -0.19
Nkx2-6P43688 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.86□□□□□ -0.19
Nkx2-6P43688 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Gm27989-201ENSMUST00000184721 107 ntBASIC13.86□□□□□ -0.19
Nkx2-6P43688 Gm17837-201ENSMUST00000186435 985 ntBASIC13.86□□□□□ -0.19
Nkx2-6P43688 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-6P43688 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.85□□□□□ -0.19
Nkx2-6P43688 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Gm23547-201ENSMUST00000158210 271 ntBASIC13.85□□□□□ -0.19
Nkx2-6P43688 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.85□□□□□ -0.19
Nkx2-6P43688 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Gm5186-201ENSMUST00000218781 920 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms