Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm25406-201ENSMUST00000157599 105 ntBASIC12.29□□□□□ -0.44
Hmx3P42581 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.29□□□□□ -0.44
Hmx3P42581 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.29□□□□□ -0.44
Hmx3P42581 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hmx3P42581 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hmx3P42581 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.29□□□□□ -0.44
Hmx3P42581 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.29□□□□□ -0.44
Hmx3P42581 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.29□□□□□ -0.44
Hmx3P42581 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hmx3P42581 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmx3P42581 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hmx3P42581 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Hmx3P42581 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.28□□□□□ -0.44
Hmx3P42581 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Hmx3P42581 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.28□□□□□ -0.44
Hmx3P42581 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hmx3P42581 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmx3P42581 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hmx3P42581 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.28□□□□□ -0.44
Hmx3P42581 Gm14859-201ENSMUST00000117752 357 ntBASIC12.28□□□□□ -0.44
Hmx3P42581 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.28□□□□□ -0.44
Hmx3P42581 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.28□□□□□ -0.44
Hmx3P42581 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmx3P42581 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.28□□□□□ -0.44
Hmx3P42581 Gm44454-201ENSMUST00000198541 138 ntBASIC12.28□□□□□ -0.44
Hmx3P42581 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmx3P42581 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.28□□□□□ -0.44
Hmx3P42581 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmx3P42581 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.28□□□□□ -0.44
Hmx3P42581 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmx3P42581 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Hmx3P42581 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmx3P42581 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hmx3P42581 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmx3P42581 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmx3P42581 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Hmx3P42581 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.27□□□□□ -0.44
Hmx3P42581 Paupar-201ENSMUST00000194826 3482 ntBASIC12.27□□□□□ -0.44
Hmx3P42581 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Hmx3P42581 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmx3P42581 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmx3P42581 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmx3P42581 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.27□□□□□ -0.44
Hmx3P42581 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hmx3P42581 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hmx3P42581 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Hmx3P42581 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.27□□□□□ -0.45
Hmx3P42581 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Hmx3P42581 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmx3P42581 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmx3P42581 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.27□□□□□ -0.45
Hmx3P42581 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.27□□□□□ -0.45
Hmx3P42581 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.27□□□□□ -0.45
Hmx3P42581 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmx3P42581 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.27□□□□□ -0.45
Hmx3P42581 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.27□□□□□ -0.45
Hmx3P42581 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hmx3P42581 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms