Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm13365-201ENSMUST00000121188 973 ntBASIC12.04□□□□□ -0.48
Timp3P39876 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.04□□□□□ -0.48
Timp3P39876 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.04□□□□□ -0.48
Timp3P39876 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.04□□□□□ -0.48
Timp3P39876 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.04□□□□□ -0.48
Timp3P39876 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.04□□□□□ -0.48
Timp3P39876 Gm10154-201ENSMUST00000084445 354 ntBASIC12.04□□□□□ -0.48
Timp3P39876 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.04□□□□□ -0.48
Timp3P39876 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Timp3P39876 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Timp3P39876 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Timp3P39876 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Timp3P39876 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Timp3P39876 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Timp3P39876 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Timp3P39876 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Timp3P39876 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Timp3P39876 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Timp3P39876 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Timp3P39876 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Timp3P39876 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.03□□□□□ -0.48
Timp3P39876 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Timp3P39876 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.03□□□□□ -0.48
Timp3P39876 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.03□□□□□ -0.48
Timp3P39876 Mir6990-201ENSMUST00000183724 91 ntBASIC12.03□□□□□ -0.48
Timp3P39876 Gm10576-201ENSMUST00000191927 825 ntBASIC12.03□□□□□ -0.48
Timp3P39876 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.03□□□□□ -0.48
Timp3P39876 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.03□□□□□ -0.48
Timp3P39876 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Timp3P39876 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Timp3P39876 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.03□□□□□ -0.48
Timp3P39876 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.03□□□□□ -0.48
Timp3P39876 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.03□□□□□ -0.48
Timp3P39876 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Timp3P39876 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.03□□□□□ -0.48
Timp3P39876 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.03□□□□□ -0.48
Timp3P39876 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Timp3P39876 Rubie-203ENSMUST00000227803 2430 ntBASIC12.02□□□□□ -0.48
Timp3P39876 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Timp3P39876 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Timp3P39876 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Timp3P39876 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.02□□□□□ -0.48
Timp3P39876 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Timp3P39876 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.02□□□□□ -0.49
Timp3P39876 Gm11745-201ENSMUST00000121669 448 ntBASIC12.02□□□□□ -0.49
Timp3P39876 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Gm18889-201ENSMUST00000174284 929 ntBASIC12.02□□□□□ -0.49
Timp3P39876 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.02□□□□□ -0.49
Timp3P39876 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.02□□□□□ -0.49
Timp3P39876 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.02□□□□□ -0.49
Timp3P39876 Gm44335-201ENSMUST00000196879 141 ntBASIC12.02□□□□□ -0.49
Timp3P39876 Gm44297-201ENSMUST00000198304 141 ntBASIC12.02□□□□□ -0.49
Timp3P39876 Gm44346-201ENSMUST00000198851 141 ntBASIC12.02□□□□□ -0.49
Timp3P39876 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.02□□□□□ -0.49
Timp3P39876 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Timp3P39876 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.02□□□□□ -0.49
Timp3P39876 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.02□□□□□ -0.49
Timp3P39876 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Timp3P39876 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.02□□□□□ -0.49
Timp3P39876 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.02□□□□□ -0.49
Timp3P39876 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Timp3P39876 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.02□□□□□ -0.49
Timp3P39876 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Timp3P39876 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Timp3P39876 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Timp3P39876 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Timp3P39876 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Timp3P39876 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Timp3P39876 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Timp3P39876 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Timp3P39876 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Timp3P39876 Efs-202ENSMUST00000227037 2540 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms