Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Col18a1P39061 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.09■□□□□ 0.65
Col18a1P39061 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 AC113441.2-201ENSMUST00000221538 1468 ntBASIC19.09■□□□□ 0.65
Col18a1P39061 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Col18a1P39061 Gm5687-201ENSMUST00000118252 640 ntBASIC19.09■□□□□ 0.65
Col18a1P39061 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC19.09■□□□□ 0.65
Col18a1P39061 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC19.09■□□□□ 0.65
Col18a1P39061 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC19.09■□□□□ 0.65
Col18a1P39061 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC19.09■□□□□ 0.65
Col18a1P39061 Tyms-ps-201ENSMUST00000219550 915 ntBASIC19.09■□□□□ 0.65
Col18a1P39061 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 AC114543.1-201ENSMUST00000226451 1558 ntBASIC19.08■□□□□ 0.65
Col18a1P39061 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col18a1P39061 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col18a1P39061 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.08■□□□□ 0.65
Col18a1P39061 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.08■□□□□ 0.65
Col18a1P39061 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col18a1P39061 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Col18a1P39061 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col18a1P39061 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col18a1P39061 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC19.08■□□□□ 0.64
Col18a1P39061 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC19.08■□□□□ 0.64
Col18a1P39061 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col18a1P39061 Gm38158-201ENSMUST00000194617 339 ntBASIC19.08■□□□□ 0.64
Col18a1P39061 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col18a1P39061 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Col18a1P39061 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col18a1P39061 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col18a1P39061 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col18a1P39061 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col18a1P39061 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC19.08■□□□□ 0.64
Col18a1P39061 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC19.07■□□□□ 0.64
Col18a1P39061 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Col18a1P39061 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Gm42929-201ENSMUST00000198374 1286 ntBASIC19.07■□□□□ 0.64
Col18a1P39061 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC19.07■□□□□ 0.64
Col18a1P39061 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col18a1P39061 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col18a1P39061 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC19.06■□□□□ 0.64
Col18a1P39061 Gm2991-201ENSMUST00000173338 480 ntBASIC19.06■□□□□ 0.64
Col18a1P39061 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
Col18a1P39061 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Col18a1P39061 Mir433-201ENSMUST00000093564 124 ntBASIC19.06■□□□□ 0.64
Col18a1P39061 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col18a1P39061 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
Col18a1P39061 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col18a1P39061 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col18a1P39061 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Col18a1P39061 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col18a1P39061 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Col18a1P39061 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col18a1P39061 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col18a1P39061 Gm17376-201ENSMUST00000166016 84 ntBASIC19.06■□□□□ 0.64
Col18a1P39061 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC19.06■□□□□ 0.64
Col18a1P39061 Gm6621-201ENSMUST00000193251 772 ntBASIC19.06■□□□□ 0.64
Col18a1P39061 Rps4l-202ENSMUST00000204242 789 ntBASIC19.06■□□□□ 0.64
Col18a1P39061 Gm9445-201ENSMUST00000207454 1285 ntBASIC19.06■□□□□ 0.64
Col18a1P39061 Gm13859-201ENSMUST00000119936 1423 ntBASIC19.06■□□□□ 0.64
Col18a1P39061 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col18a1P39061 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col18a1P39061 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col18a1P39061 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col18a1P39061 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col18a1P39061 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Col18a1P39061 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col18a1P39061 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Col18a1P39061 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC19.05■□□□□ 0.64
Col18a1P39061 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col18a1P39061 Gm11658-201ENSMUST00000120913 1008 ntBASIC19.05■□□□□ 0.64
Col18a1P39061 Gm2467-201ENSMUST00000182266 1010 ntBASIC19.05■□□□□ 0.64
Col18a1P39061 Gm6981-201ENSMUST00000182467 1008 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms