Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdh4P39038 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Gm18057-201ENSMUST00000208220 503 ntBASIC14.04□□□□□ -0.16
Cdh4P39038 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdh4P39038 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.04□□□□□ -0.16
Cdh4P39038 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cdh4P39038 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.04□□□□□ -0.16
Cdh4P39038 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Gm23935-201ENSMUST00000102303 57 ntBASIC14.03□□□□□ -0.16
Cdh4P39038 Gm24270-201ENSMUST00000102326 57 ntBASIC14.03□□□□□ -0.16
Cdh4P39038 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.03□□□□□ -0.16
Cdh4P39038 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.03□□□□□ -0.16
Cdh4P39038 Gm24245-201ENSMUST00000157318 57 ntBASIC14.03□□□□□ -0.16
Cdh4P39038 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Chchd1-203ENSMUST00000224633 557 ntBASIC14.03□□□□□ -0.16
Cdh4P39038 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdh4P39038 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.03□□□□□ -0.16
Cdh4P39038 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Cdh4P39038 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Cdh4P39038 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh4P39038 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.03□□□□□ -0.16
Cdh4P39038 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh4P39038 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh4P39038 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh4P39038 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh4P39038 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh4P39038 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh4P39038 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.02□□□□□ -0.16
Cdh4P39038 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh4P39038 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh4P39038 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Cdh4P39038 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.02□□□□□ -0.17
Cdh4P39038 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.02□□□□□ -0.17
Cdh4P39038 Gm15483-201ENSMUST00000120338 456 ntBASIC14.02□□□□□ -0.17
Cdh4P39038 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.02□□□□□ -0.17
Cdh4P39038 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh4P39038 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.02□□□□□ -0.17
Cdh4P39038 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.02□□□□□ -0.17
Cdh4P39038 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh4P39038 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh4P39038 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh4P39038 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh4P39038 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cdh4P39038 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.02□□□□□ -0.17
Cdh4P39038 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Cdh4P39038 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh4P39038 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh4P39038 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh4P39038 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh4P39038 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdh4P39038 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.01□□□□□ -0.17
Cdh4P39038 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.01□□□□□ -0.17
Cdh4P39038 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms