Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HmgclP38060 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HmgclP38060 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HmgclP38060 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HmgclP38060 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HmgclP38060 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HmgclP38060 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.43□□□□□ -0.1
HmgclP38060 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HmgclP38060 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HmgclP38060 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HmgclP38060 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.43□□□□□ -0.1
HmgclP38060 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HmgclP38060 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.43□□□□□ -0.1
HmgclP38060 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.43□□□□□ -0.1
HmgclP38060 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.43□□□□□ -0.1
HmgclP38060 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.43□□□□□ -0.1
HmgclP38060 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.43□□□□□ -0.1
HmgclP38060 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.43□□□□□ -0.1
HmgclP38060 Gm37230-201ENSMUST00000194491 818 ntBASIC14.43□□□□□ -0.1
HmgclP38060 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.43□□□□□ -0.1
HmgclP38060 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Gm18057-201ENSMUST00000208220 503 ntBASIC14.43□□□□□ -0.1
HmgclP38060 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.43□□□□□ -0.1
HmgclP38060 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.43□□□□□ -0.1
HmgclP38060 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HmgclP38060 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.43□□□□□ -0.1
HmgclP38060 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.43□□□□□ -0.1
HmgclP38060 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.43□□□□□ -0.1
HmgclP38060 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HmgclP38060 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HmgclP38060 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Gm18737-201ENSMUST00000173594 937 ntBASIC14.42□□□□□ -0.1
HmgclP38060 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HmgclP38060 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HmgclP38060 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HmgclP38060 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HmgclP38060 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HmgclP38060 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HmgclP38060 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HmgclP38060 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HmgclP38060 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HmgclP38060 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HmgclP38060 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.41□□□□□ -0.1
HmgclP38060 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HmgclP38060 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.41□□□□□ -0.1
HmgclP38060 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.41□□□□□ -0.1
HmgclP38060 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HmgclP38060 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
HmgclP38060 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HmgclP38060 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HmgclP38060 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HmgclP38060 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.41□□□□□ -0.1
HmgclP38060 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms