Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Cbx3P23198 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cbx3P23198 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cbx3P23198 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.39□□□□□ -0.27
Cbx3P23198 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.39□□□□□ -0.27
Cbx3P23198 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.39□□□□□ -0.27
Cbx3P23198 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Gm36967-201ENSMUST00000193814 266 ntBASIC13.39□□□□□ -0.27
Cbx3P23198 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cbx3P23198 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cbx3P23198 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cbx3P23198 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.39□□□□□ -0.27
Cbx3P23198 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cbx3P23198 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cbx3P23198 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.38□□□□□ -0.27
Cbx3P23198 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.38□□□□□ -0.27
Cbx3P23198 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.38□□□□□ -0.27
Cbx3P23198 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.38□□□□□ -0.27
Cbx3P23198 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Cbx3P23198 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cbx3P23198 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.38□□□□□ -0.27
Cbx3P23198 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cbx3P23198 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cbx3P23198 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cbx3P23198 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cbx3P23198 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cbx3P23198 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cbx3P23198 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Mir5130-201ENSMUST00000175160 84 ntBASIC13.37□□□□□ -0.27
Cbx3P23198 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.37□□□□□ -0.27
Cbx3P23198 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.37□□□□□ -0.27
Cbx3P23198 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cbx3P23198 Gm7370-201ENSMUST00000219471 767 ntBASIC13.37□□□□□ -0.27
Cbx3P23198 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cbx3P23198 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Cbx3P23198 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cbx3P23198 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms