Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl3P10855 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl3P10855 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.9□□□□□ -0.34
Ccl3P10855 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ccl3P10855 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl3P10855 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccl3P10855 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.9□□□□□ -0.34
Ccl3P10855 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ccl3P10855 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ccl3P10855 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.9□□□□□ -0.34
Ccl3P10855 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.9□□□□□ -0.34
Ccl3P10855 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.9□□□□□ -0.34
Ccl3P10855 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccl3P10855 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccl3P10855 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl3P10855 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl3P10855 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl3P10855 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccl3P10855 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccl3P10855 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
Ccl3P10855 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 BC001981-202ENSMUST00000191393 1545 ntBASIC12.89□□□□□ -0.35
Ccl3P10855 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccl3P10855 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccl3P10855 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Ccl3P10855 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.89□□□□□ -0.35
Ccl3P10855 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.89□□□□□ -0.35
Ccl3P10855 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccl3P10855 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccl3P10855 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccl3P10855 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ccl3P10855 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccl3P10855 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Ccl3P10855 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Ccl3P10855 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.89□□□□□ -0.35
Ccl3P10855 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccl3P10855 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccl3P10855 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Ccl3P10855 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccl3P10855 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl3P10855 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Gm11918-201ENSMUST00000121660 179 ntBASIC12.88□□□□□ -0.35
Ccl3P10855 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Ccl3P10855 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Ccl3P10855 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccl3P10855 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccl3P10855 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.88□□□□□ -0.35
Ccl3P10855 Gm8602-201ENSMUST00000184045 607 ntBASIC12.88□□□□□ -0.35
Ccl3P10855 Mir6392-201ENSMUST00000184924 108 ntBASIC12.88□□□□□ -0.35
Ccl3P10855 Gm33320-201ENSMUST00000192232 530 ntBASIC12.88□□□□□ -0.35
Ccl3P10855 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.88□□□□□ -0.35
Ccl3P10855 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.88□□□□□ -0.35
Ccl3P10855 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.88□□□□□ -0.35
Ccl3P10855 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccl3P10855 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccl3P10855 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.88□□□□□ -0.35
Ccl3P10855 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms